Malta Boat Tours: What to Know Before Booking (Private & Group)

The beautiful turquoise blue sea in Malta between the islands of Gozo and Comino from above. There are a few clouds in the sky and several boats and yachts in the picture. Taking a Malta boat tour is a great way to explore the island.
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Planning a Malta boat tour and not sure which one is actually worth booking? You’re not alone!

With dozens of options ranging from large group cruises to private charters, choosing the right boat trip in Malta can feel overwhelming.

From half–day tours to Comino and the Blue Lagoon to private boat charters exploring sea caves and hidden swimming spots, boat trips are one of the best ways to experience Malta’s coastline.

It was one of our favourite experiences during our time on the islands.

Before you book, there are a few important things to know, including:
🔹whether a private or group tour makes more sense
🔹how crowded Comino really gets
🔹what prices typically look like, and
🔹what’s actually included in most boat trips

In this guide, we’re sharing 10 essential things to know before booking a Malta boat tour, plus recommendations to help you choose the best option for your travel style and budget.

⌚Don’t have time to read?

👉I highly recommend this private boat tour of Comino & the Blue Lagoon for the secluded locations.

Best Malta Boat Tours (Private & Group Options)

#1 Private Tour
A private Malta boat tour anchored close to shore in the turquoise waters. The boat is covered and comfortable. There are underwater rocks in the foreground.

Comino, Blue Lagoon, Crystal Lagoon & Sea Caves Tour

⭐5 stars
✔️Visit secluded spots
✔️Snorkel gear included
✔️Excellent value
✔️Knowledgeable skipper

#1 Group Tour
A bird's eye view of a large boat tour in Malta. The ship is anchored in a turquoise lagoon and people are swimming. There are rocks jutting out of the water on the sides of the image.

Gozo & Comino: Blue Lagoon, Crystal Lagoon & Seacaves Tour

⭐4.4 out of 5 stars
✔️Swim & snorkel
✔️Visit Gozo highlights
✔️Large boat or catamaran
✔️Waterslide & loungers

How Much Do Malta Boat Tours Cost?

Malta boat tour prices vary widely depending on the type of tour, group size, duration, and season.

While prices fluctuate throughout the year, most boat trips in Malta fall into a few predictable ranges.

Here’s what you can realistically expect to pay.

Average Prices for Group Boat Tours

Group boat tours are the most budget–friendly option and usually follow set routes to popular spots like Comino, the Blue Lagoon, Crystal Lagoon, and sea caves.

Most group tours include swimming stops and basic onboard amenities, but they also tend to follow fixed schedules and can get crowded during peak season.

Price Range for Group Boat Tours in Malta
👉€25–€40 per person for half–day tours
👉€40–€60 per person for longer or full–day tours

These tours are best for travelers who:
🔹want a social, lively atmosphere
🔹are visiting Malta on a tighter budget
🔹don’t mind sharing swimming spots with larger groups

HELPFUL TIP: During summer, group tours to Comino & Blue Lagoon often fill up quickly and can feel busy, especially midday.

Average Prices for Private Boat Tours

Private boat tours in Malta offer a more personalized experience, with flexible itineraries and access to quieter swimming spots away from the crowds.

Prices are typically based on the boat and duration, not per person, making private tours surprisingly good value for couples, families, or small groups.

Price Range for Private Boat Tours in Malta
👉€250–€400 for half-day private tours
👉€400–€700+ for full-day private charters

Private tours often include:
🔹a dedicated skipper
🔹custom routes and flexible timing
🔹stops at less crowded coves and caves

They’re especially popular for Comino and Blue Lagoon trips, where avoiding peak crowds can make a huge difference in the overall experience.

Is a Private Boat Tour Worth It?

In many cases — yes, especially if you value comfort, flexibility, and a more relaxed pace.

Private Boat Tours are Worth the Extra Cost if You:
➡️prefer quieter swimming spots
➡️want control over timing and itinerary
➡️travel with a partner, family, or small group
➡️want to avoid the busiest hours at the Blue Lagoon

When split between multiple people, private boat tours can cost only slightly more per person than premium group tours — with a significantly better experience.

That said, group tours can still be a great option if you’re short on time, traveling solo, or simply want an easy, no-planning–required way to see Malta from the water.

The beautiful turquoise water of the Blue Lagoon in Malta, one of the most popular places to visit. There are small cliffs in the background and a small boat tour in the foreground.

10 Things to Know Before Booking a Malta Boat Tour

With so many Malta boat tours, knowing your options and the kind of adventure you’re craving will help make your decision easier.

Here are the 10 things to know before booking to ensure your Malta boat tour aligns with your expectations.

1. Book Your Boat Tour in Advance

Gavin standing in a black sleeveless shirt and sunglasses, standing in front of the aqua waters of Comino Island. There are people swimming and several Malta boat tours in the distance.

Most Malta boat tour companies offer easy online booking, making it convenient to secure your spot with just a few clicks.

We highly recommend booking in advance, especially during high season.

Malta is gaining in popularity as a top tourist destination, so reserving your boat tour in advance is the smart choice.

Some allow last-minute bookings. But to ensure you don’t miss out on this incredible experience, I would organize your Malta boat trip ahead of time.

Most companies offer free cancellations up to 24 hours before the trip. And some provide full refunds in case of cancellations due to adverse weather conditions.

HELPFUL TIP: Make sure to read the tour operator’s cancellation and refund policy before booking your boat tour.

2. Sightseeing vs Snorkeling: Choose Your Focus

A gorgeous limestone cliff jutting out of the cobalt blue water. You can see 2 different caves from the boat.

Before booking your Malta boat tour, consider the type of experience you want.

👉What’s Your Interest?
✔️Exploring hidden coves
✔️Swim and snorkel
✔️Adventurous cliff-jumping
✔️Discover less-touristy spots

Malta offers a variety of boat tours, so be sure to research and choose one that aligns with your preferences.

Popular options are sunset cruises, full-day tours, and private charters.

HELPFUL TIP: Check the boat tour itinerary before booking to ensure it includes the activities and locations you’re interested in.

3. Private vs Group Tours: What’s Best for You?

A man jumping off a yacht into the ocean. Two women are sitting on the back of the boat. Knowing if you prefer a group or private experience will help you choose which Malta boat tour is right for you.

When booking a boat tour in Malta, consider your travel style.

👉What’s Your Travel Style?
✔️Like to meet new people
✔️Hate crowds
✔️Require more flexibility
✔️Prefer a quiet, intimate experience

Although group boat tours are more affordable, not everyone loves crowds (like us).

Private boat tours offer flexibility and the luxury of having the entire boat for just your party.

You have the freedom to customize your itinerary, so you decide the time that works for you and how long to spend at each location.

If you live with chronic pain like me, traveling at your own pace is essential.

4. Boat Size Matters: Large Boats vs Small Boats

A small group of people on a Malta boat tour in the Blue Lagoon. There is a larger boat behind them. Knowing if you prefer a small or large boat will help in your decision.

With so many Malta boat tours to choose from, it may come down to the size of the boat.

Different types and sizes of vessels are used for boat tours ranging from small motorboats to larger catamarans or sailing yachts.

Larger boats may offer more onboard amenities and facilities, like a bar, sundeck, bathrooms, and seating areas. They also tend to be more stable in choppy waters.

Smaller boats offer a more personalized experience with fewer people onboard. This is perfect for families or couples looking for a quieter getaway.

Small boats can also reach more secluded areas and hidden gems that larger boats cannot access.

Consider your comfort level and preference when deciding between a large or small vessel for your Malta boat tour.

HELPFUL TIP: If you get seasick, opt for a larger boat with stabilizers to ensure a smoother ride.

5. Comino & the Blue Lagoon Get Extremely Crowded

The crowded docking area on Comino Island. There are people standing on the dock under umbrellas, as well as people in the foregound climbing to find a spot to relax. There is a speedboat approaching and a huge tour boat from Malta behind them. This popular destination gets very crowded, especially in summer.

One of the most popular stops on most Malta boat tours is the Blue Lagoon on Comino Island.

While its clear, turquoise waters are gorgeous, it can get extremely crowded with tourists. This is especially true during peak season.

We left disappointed after an hour because it was overrun with tourists.😳

Be prepared to share this magical spot with a gazillion other tourists.

There are limited places to relax close to the water.

Expect to walk up a steep hill to find a quieter spot to lay your towel. This is something to consider if you struggle with fatigue and mobility.

If the Blug Lagoon is on your bucket list, arrive early in the morning or later in the evening. These times are a little less busy.

Or better yet, find a less popular but equally stunning location to swim and snorkel.

HELPFUL TIP: Bring your own drinks to avoid purchasing the overpriced beverages and snacks they sell in the few shops on Comino.

6. Price vs Value: What You’re Really Paying For

A white, smaller Malta boat tour with an ivory canopy in a secluded area of Comino Island. There are limestone cliffs and rocks with green shrubs and the aqua water is calm. It is easier to find these quiet spots on a private tour.

It’s important to compare the prices, but don’t solely base your decision on cost alone. Instead, consider the value the company offers in return.

Cheap tours may not offer the best value, may be overcrowded, or limit the time at each location.

More expensive tours may offer higher service and amenities, a more personalized experience, or unique excursions.

It’s always a good idea to research options and read reviews from previous customers before making a decision.

Find the right balance between price and value for your needs and budget.

7. Best Time of Day for a Boat Tour in Malta

A gorgeous sunset with deep yellow, pink and blue skies. The clouds are lightly shaded and the water churned up from a nearby boat is turquoise. You can see Valletta in the distance.

The best time to go on a boat tour in Malta is from April to October.

To avoid the busy season, visit during the shoulder season when the weather is still warm but there are fewer tourists.

Summer is the busiest (and most popular) time for boat trips in Malta.

We visited in July, and a boat trip in Malta was a must! However, be prepared for higher prices and more crowds.

If you’re looking for a romantic excursion, you may want to consider a Sunset Cruise to the Blue Lagoon.

HELPFUL TIP: If you travel at the start of April or the end of October, it can get cold and windy on the open water, so pack warm clothing.

8. What’s Included (and What’s Not)

A larger Malta boat tour seen from above. The boat is white with 2 rows of loungers along the edge and 4 solar panels on the back. You can see people swimming in the light turquoise Mediterranean water.

Every boat trip in Malta will include different things in the price. Here are common things to look out for when choosing your boat trip.

  • Knowledgeable tour guide
  • Snorkeling gear (if included in the tour)
  • Refreshments such as water, soft drinks, and alcohol (may cost extra)
  • Access to swimming spots (if included in the tour)
  • Lunch or snacks (if included in the tour)
  • Transfer to/from your hotel (may cost extra)

Some boat tours may also include additional activities like jet skiing or parasailing.

Be sure to read the tour description carefully before booking.

HELPFUL TIP: Find a tour that meets your specific needs, especially if you have a hidden disability. (eg. shaded deck seating)

9. Where Boat Tours Depart From

A traditional red, yellow and blue Maltese boat anchored in the harbor. There are several other boats in the water and the city in the distance. Boat tours in Malta depart from St. Julian's, Sliema and Mellieha.

Unfortunately, there are no boat tours from Valletta, only private sailing excursions. But if that’s your thing, then check out this tour!

Most tour companies offer boat trips from popular tourist areas like Sliema, St. Julian’s, Bugibba near St. Paul’s Bay, and Mellieha, one of the best towns to visit in Malta.

If you want to join a Malta boat trip from Gozo, you can do that too.

HELPFUL TIP: If you’re staying at one of the amazing adult only hotels in Valletta, it’s easy to take the ferry to Sliema to join your boat tour. Or choose a tour that includes a transfer from your hotel.

10. What to Bring on a Malta Boat Trip

Robyn smiling wearing sunglasses and a white beach dress over her bathing suit. She is sitting in a private boat with a small Malta flag and touring  the caves around Comino.

Going on a boat tour is one of the best things to do in Malta, but you need to be prepared. Here are a few essentials you should bring on your boat trip.

✅ Water: in the summer it gets HOT, so always carry water with you

Sunscreen: (preferably reef-safe) the sun is hot and there will be limited shade on Comino, the boat deck, and when swimming in lagoons

Sunglasses & Hat: again for the limited shade

Towel: to dry off & lay on

Swimsuit: a given… no swimming nude here

Water shoes: if you plan on swimming in rocky areas

Waterproof phone case/cover: better to be safe than sorry!

Seasickness Bands or Tablets: I swear by these sea bands

✅Snacks: if you’re like me, you need snacks all day. Drinks & snacks for purchase on the boat/Comino will be pricey!

HELPFUL TIP: It’s always a good idea to bring a small bag or backpack to store your belongings, and best if it’s waterproof.

The view of Mellieha, the cathedral a tall green tree and blue sea from a balcony at the Lure Hotel, one of the best adult only hotels in Malta. There is a private jacuzzi and comfortable loungers overlooking the town.

Best Places to Stay for Boat Tours in Malta

Malta has an abundance of amazing places to stay.

We stayed in a few different hotels during our 12-day trip to Malta and found each location offers something unique.

From luxurious resorts to charming BnBs, we think these are the best places to stay in Malta.

Valletta

As the capital of Malta, Valletta offers a mix of historical charm, modern amenities, and amazing attractions.

📍Valletta Lucente: A family-run boutique hotel in the old town with elegantly furnished rooms, and a delicious breakfast.
➡️Book your stay at Valletta Lucente now!

Mellieha

This charming village is located on one of the few sandy beaches in Malta. It offers a quieter escape with stunning views of the sea.

📍 Lure Hotel & Spa: A luxury adult-only hotel with amazing service, indoor & outdoor pools, and a great spa only 5 min from the beach.
➡️Book your stay at Lure Hotel & Spa now!

St. Julian’s

St. Julian’s is a popular seaside town, known for its vibrant nightlife, beautiful beaches, and fantastic restaurants.

📍 Hotel Valentina: An upscale 4-star hotel with a rooftop pool, sun loungers & poolside bar, and modern rooms with a balcony.
➡️Book your stay at Hotel Valentina now!

The gorgeous limestone cliffs against the deep blue sea. Taking a Malta boat tour is the best way to appreciate this beautiful scenery.

FAQs: About Malta Boat Trips

Is the Blue Lagoon in Malta worth visiting?

Yes, absolutely! The reason it’s such a popular attraction is because the clear turquoise waters are stunning! It can get insanely crowded during peak season, so taking a boat tour is the best way to experience the Blue Lagoon without having to step foot on Comino Island.


What is the best month for a Malta boat tour?

The best time to visit Malta is during the shoulder season in April, May, September, and October. The weather is perfect and not as hot as the summer months. Plus, there are fewer crowds and prices are more affordable.


How many days do you need in Malta?

Spending at least 3-4 days in Malta will give you time to explore its many historical sites, beautiful beaches, and charming towns. You can visit the Blue Lagoon and check out the island of Gozo. However, to appreciate the Maltese culture and explore more hidden gems, then at least a week is ideal.

A small rock island at the edge of the Blue Lagoon. There are two sailboats anchored nearby and a small boat tour on the left side. Taking a Malta boat tour is one of the best things to do when visiting this amazing country.

Final Thoughts: Is a Malta Boat Tour Worth It?

Taking a Malta boat tour is the best way to appreciate and explore this tiny island country’s breathtaking beauty.

Joining one of the Malta boat tours offers a unique opportunity to experience the insane waters of the Blue Lagoon and the natural caves of Gozo and Comino.

Hopefully, our post gave you a few things to consider and helped you decide which of the Malta boat tours is right for your adventure!

The world map in blue with the words "Time to add another passport stamp!" on top in black.

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